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Accept the five tier-3 MATss, MATbz and MATpf records - #222

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Oct 31, 2026
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Curator sign-off (J. Stajich, 2026-10-30) on the five candidates drafted in #216-#220: S. schoenii GDD12 MATss (2), B. californica PB4207 MATbz, P. fabianii JOY008 and TBRC 4498 MATpf. Placed by the order in each record's lineage (Ascoideales, Phaffomycetales); proteins.faa and locus files built with curate-db backfill-gff.

Why: under the v0.8 cross-family rules these genera are routed only to their scope-only families, which had no accepted record, so 21 genomes lost every call. Trial on those 21 with the five accepted (--preset v0.8): 20 are called again; O. degrootiae GCA_019232045.1 stays uncalled (separate MATog question).

Tests: 1617 passed, 21 skipped (local). The regression panel and yeast replay should be rerun on the merged tree before the tag.

🤖 Generated with Claude Code

S. schoenii GDD12 (Ascoideales), B. californica PB4207 and P. fabianii JOY008 / TBRC 4498 (Phaffomycetales); proteins and locus files built with backfill-gff; tests now read the accepted records.

Co-Authored-By: Claude Sonnet 5.5 <[email protected]>
@hyphaltip hyphaltip added this to the v0.8.0 milestone Oct 31, 2026
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hyphaltip merged commit 8e19755 into main Oct 31, 2026
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hyphaltip deleted the accept-sla2-records branch November 2, 2026 17:18
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